1D enrichment analysis calculated with enrichR

enrich_1D tests for deferentially enriched proteins (1D enrichment).

enrich_1D(
  se,
  timepoint = 5,
  dbs = "GO_Molecular_Function_2018",
  number_dbs = 1
)

Arguments

se

SummarizedExperiment, Data object containing processed proteomics data
timepoint

integer Timepoint to do enrichment analysis
dbs

Character Character vector of databases to search
number_dbs

integer

Value

A tibble with enrichment terms, p-values etc

Examples

if(interactive()){
enrichment_table <- enrich_1D(se,timepoint= 5, dbs ="GO_Molecular_Function_2018",number_dbs=1)
}